CDS

Accession Number TCMCG007C05752
gbkey CDS
Protein Id XP_033129526.1
Location complement(4793160..4794080)
Gene LOC103855861
GeneID 103855861
Organism Brassica rapa

Protein

Length 306aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033273635.1
Definition putative RING-H2 finger protein ATL53 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category O
Description ubiquitin-protein transferase activity
KEGG_TC -
KEGG_Module M00065        [VIEW IN KEGG]
KEGG_Reaction R05918        [VIEW IN KEGG]
KEGG_rclass RC00004        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K05283        [VIEW IN KEGG]
ko:K19041        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00563        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
map00563        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080167        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGTCCGATCCAAACCCTAATGCTCTGAATCAATACATAAATCCAAGAGATTGCACTCAAGGCTTTTGTTCCACGTTTTGTCCTCAATGGTGTAGTTACATCAAGTTCTCTCCACCACCACTTTCCTATGAACAATTCCTAACCGACGGTGTTTCATCAAACCCTAGTGTTTCCCCTCTTCTCATCGCCCTCATTGGAATCCTTGGAAGTGCATTTCTCTTAGCAACTTACTACACTCTTGTCTCAAGGCATTGCGCCACCGACACAAACGATGAAGCTGCCTCAGACACGGGTAGATCTGATCTAATTATGGATGTTAACTCGCCAGAAAGTCAAGATCATGACAACCCTTTTGCTCATGAGTCTTCAAACGCCGGGTTGGACGATGCCGTGATAAAGAAGATAGGGTGTTTCAAGTTGAAGAAGCATCAAAGCGGGCTCAAGATCAATGTTACTGATTGTTCCATATGTCTTGGAGAGTTTAATGAAGAGGAGAGCTTAAGGTTATTGCCTAACTGTAACCACATTTTCCACGTGGTCTGTATTGATCGGTGGCTCACCTCTCACTCAAACTGTCCGCTTTGTCGGGGTAAGATCATTGTTCCTACCACTCAAGAAACCGATCATGTCTTTGTGGTGATGAATCTTGATCGGTTTACTAGCAATGCTGGACCAGCAGTGGGAAATGTAATGGTTCTTGATCCTCGTGAAGAGGTTAGTGTTTCGATCAGTTCTCATCATCCACGACGATTCTCGGCCGCTGATATTGTTATGTGGATGAGCAGAGACGGAGAAGAGGAAGAGAGAAATTATGATCTTGAAAATGGAAACAGAGTGAAGCTTGTAGACTACTTAAAAAGATCATTCTCAAGTGGTGGATTGGTTCTTGGGGCTCAAGGACCGACTAGGAGATCCTAA
Protein:  
MESDPNPNALNQYINPRDCTQGFCSTFCPQWCSYIKFSPPPLSYEQFLTDGVSSNPSVSPLLIALIGILGSAFLLATYYTLVSRHCATDTNDEAASDTGRSDLIMDVNSPESQDHDNPFAHESSNAGLDDAVIKKIGCFKLKKHQSGLKINVTDCSICLGEFNEEESLRLLPNCNHIFHVVCIDRWLTSHSNCPLCRGKIIVPTTQETDHVFVVMNLDRFTSNAGPAVGNVMVLDPREEVSVSISSHHPRRFSAADIVMWMSRDGEEEERNYDLENGNRVKLVDYLKRSFSSGGLVLGAQGPTRRS